Publications by Department Members

2012

  • Domanski D, Freue GVCohen*, Sojo L, Kuzyk MA, Ratkay L, Parker CE, et al.   The use of multiplexed MRM for the discovery of biomarkers to differentiate iron-deficiency anemia from anemia of inflammation   Journal of proteomics. 2012   75:   3514–3528.*Equal contributors..        
  • Domanski D, Percy AJ, Yang J, Chambers AG, Hill JS, Freue GVCohen, et al.   MRM-based multiplexed quantitation of 67 putative cardiovascular disease biomarkers in human plasma   Proteomics. 2012   12:   1222–1243.        
  • Dou Y, Le ND, Zidek JV.   Temporal forecasting with a Bayesian spatial predictor: Application to ozone   Advances in Meteorology. 2012   2012:          
  • Freue GVCohen, Borchers CH.   Multiple Reaction Monitoring (MRM) Principles and Application to Coronary Artery Disease   Circulation: Cardiovascular Genetics. 2012   5:   378–378.        
  • Fujiwara T, Barr RG, Brant RF, Rajabali F, Pike I.   Using International Classification of Diseases, 10th edition, codes to estimate abusive head trauma in children   Am J Prev Med. 2012   43:   215–220.        
  • Goodin D, Hartung H, O'Connor P, Filippi M, Arnason B, Comi G, et al.   Neutralizing antibodies to interferon beta-1b in multiple sclerosis: a clinico-radiographic paradox in the BEYOND trial   Multiple Sclerosis Journal. 2012   18:   181-195.   DOI: 10.1177/1352458511418629      
  • Goodin DS, Hartung H, O’Connor P, Filippi M, Arnason B, Comi G, et al.   Neutralizing antibodies to interferon beta-1b multiple sclerosis: a clinico-radiographic paradox in the BEYOND trial   Multiple Sclerosis Journal. 2012   18:   181–195.        
  • Gover A, Brummelte S, Synnes AR, Miller SP, Brant R, Weinberg J, et al.   Single course of antenatal steroids did not alter cortisol in preterm infants up to 18 months   Acta Paediatr.. 2012   101:   604–608.        
  • GΓΌnther OP, Chen V, Freue GCohen, Balshaw RF, Tebbutt SJ, Hollander Z, et al.   A computational pipeline for the development of multi-marker bio-signature panels and ensemble classifiers   BMC bioinformatics. 2012   13:   1.        
  • Gustafson P.   Double-robust estimators: Slightly more Bayesian than meets the eye?   International Journal of Biostatistics. 2012   8:   issue 2, article 4.   DOI: 10.2202/1557-4679.1349      
  • Gustafson P.   On the behaviour of Bayesian credible intervals in partially identified models   Electronic Journal of Statistics [Internet]. 2012   6:   2107-2124.   DOI: 10.1214/12-EJS741   URL: projecteuclid.org/euclid.ejs/1351865119    
  • Gustafson P.   Double-robust estimators: slightly more Bayesian than meets the eye?   The international journal of biostatistics. 2012   8:   1–15.   DOI: 10.2202/1557-4679.1349      
  • Heckman N.   The theory and application of penalized methods or Reproducing Kernel Hilbert Spaces made easy   Statist. Surv. [Internet]. 2012   6:   113–141.   DOI: 10.1214/12-SS101   URL: http://dx.doi.org/10.1214/12-SS101    
  • Hosseini R, Le ND, Zidek JV.   Time-varying markov models for binary temperature series in agrorisk management   Journal of agricultural, biological, and environmental statistics. 2012   17:   283–305.        
  • Hu F, Zidek J.   Likelihood With Applications   Empirical Bayes and Likelihood Inference. 2012   148:   211.        
  • Hua L, Joe H.   Tail comonotonicity and conservative risk measures   ASTIN Bulletin. 2012   42:   601-629.   DOI: 10.2143/AST42.2.2182810      
  • Hua L, Joe H.   Tail comonotonicity: Properties, constructions, and asymptotic additivity of risk measures   Insurance Mathematics & Economics. 2012   51:   492-503.   DOI: 10.1016/j.insmatheco.2012.07.006      
  • Joe H, Seshadri V, Arnold BC.   Multivariate inverse Gaussian and skew-normal densities   Statistics & Probability Letters. 2012   82:   2244-2251.   DOI: 10.1016/j.spl.2012.08.004      
  • Joe H.   Book Review of ``Inequalities: Theory of Majorization and Its Applications, by AW Marshall, I. Olkin and BC Arnold, Springer"   Probability in the Engineering and Informational Sciences. 2012   26:   449–453.   DOI: 10.1017/S0269964812000113      
  • Jue JS, Press MJ, McDonald DJ, Volpp KG, Asch DA, Mitra N, et al.   The impact of price discounts and calorie messaging on beverage consumption: A multi-site field study   Preventive Medicine [Internet]. 2012   55:   629–633.     URL: http://dx.doi.org/10.1016/j.ypmed.2012.10.009    
  • Jun S, Wang L, Bouchard-CΓ΄tΓ© A.   Entangled Monte Carlo   Advances in Neural Information Processing Systems 25 (NIPS). 2012   25:   2735–2743.        
  • Kondo Y, Salibian-Barrera M, Zamar R.   A robust and sparse K-means clustering algorithm   arXiv preprint arXiv:1201.6082. 2012            
  • Li P, Chen J.   Testing the order of a finite mixture   Journal of the American Statistical Association. 2012            
  • Liu J, Gustafson P.   On the detectability of different forms of interaction in regression models   Metrika. 2012   75:   347–365.   DOI: 10.1007/s00184-010-0330-8      
  • Liu W, WU L.   Two-step and likelihood methods for HIV viral dynamic models with covariate measurement errors and missing data   Journal of Applied Statistics [Internet]. 2012   39:   963–978.   DOI: 10.1080/02664763.2011.632404   URL: http://dx.doi.org/10.1080/02664763.2011.632404    
  • Louie RJ, Guo J, Rodgers JW, White R, Shah N, Pagant S, et al.   A yeast phenomic model for the gene interaction network modulating CFTR-deltaF508 protein biogenesis   Genome Med. 2012   4:   103.        
  • Louie RJ, Guo J, Rodgers JW, White R, Shah NA, Pagant S, et al.   A yeast phenomic model for the gene interaction network modulating CFTR-Delta F508 protein biogenesis   GENOME MEDICINE. 2012   4:   103.        
  • Louie RJ, Guo J, Rodgers JW, White R, Shah NA, Pagant S, et al.   A yeast phenomic model for the gene interaction network modulating F508del-CFTR protein biogenesis   Genome Medicine. 2012   4:          
  • MacLehose R, Gustafson P.   Is probabilistic bias analysis approximately Bayesian?   Epidemiology [Internet]. 2012   23:   151.   DOI: 10.1097/EDE.0b013e31823b539c   URL: 10.1097/EDE.0b013e31823b539c    
  • Masse LC, McKay H, Valente M, Brant R, Naylor PJ.   Physical activity implementation in schools: a 4-year follow-up   Am J Prev Med. 2012   43:   369–377.        
  • McCandless LC, Gustafson P, Levy AR, Richardson S.   Hierarchical priors for bias parameters in Bayesian sensitivity analysis for unmeasured confounding   Statistics in Medicine. 2012   31:   383–396.   DOI: 10.1002/sim.4453      
  • McDonald DJ.   Generalization error bounds for state-space models   . 2012            
  • McLellan JL, O'Neil NJ, Barrett I, Ferree E, van Pel DM, Ushey K, et al.   Synthetic Lethality of Cohesins with PARPs and Replication Fork Mediators   PLOS GENETICS. 2012   8:   e1002574.   DOI: 10.1371/journal.pgen.1002574      
  • Mostafavi S, Goldenberg A, Morris Q.   Labeling Nodes Using Three Degrees of Propagation   PLOS ONE. 2012   7:   e51947.   DOI: 10.1371/journal.pone.0051947      
  • Mostafavi S, Morris Q.   Combining many interaction networks to predict gene function and analyze gene lists   PROTEOMICS. 2012   12:   1687-1696.   DOI: 10.1002/pmic.201100607      
  • Nikoloulopoulos AK, Joe H, Li H.   Vine copulas with asymmetric tail dependence and applications to financial return data   Computational Statistics & Data Analysis. 2012   56:   3659-3673.   DOI: 10.1016/j.csda.2010.07.016      
  • Noh M, WU L, Lee Y.   Hierarchical likelihood methods for nonlinear and generalized linear mixed models with missing data and measurement errors in covariates   Journal of Multivariate Analysis [Internet]. 2012   109:   42–51.   DOI: 10.1016/j.jmva.2012.02.011   URL: http://www.sciencedirect.com/science/article/pii/S0047259X12000528    
  • Norman WV, Chiles JL, Turner CA, Brant R, Aslan A, Kaczorowski J.   Comparing the effectiveness of copper intrauterine devices available in Canada. Is FlexiT non-inferior to NovaT when inserted immediately after first-trimester abortion? Study protocol for a randomized controlled trial   Trials. 2012   13:   147.        
  • Panagiotelis A, Czado C, Joe H.   Pair copula constructions for multivariate discrete data   Journal of the American Statistical Association. 2012   107:   1063-1072.   DOI: 10.1080/01621459.2012.682850      
  • Park Y, Bader JS.   How networks change with time   Bioinformatics. 2012   28:   i40–8.        
  • Parker R, Guarna M, Melathopoulos AP, Moon K, White R, Huxter E, et al.   Correlation of proteome-wide changes with social immunity behaviors provides insight into resistance to the parasitic mite, Varroa destructor, in the honey bee (Apis mellifera)   Genome Biol. 2012   13:   R81–2012.        
  • Pena D, Viladomat J, Zamar R.   Nearest-neighbors medians clustering   Statistical Analysis and Data Mining [Internet]. 2012   5:   349–362.   DOI: 10.1002/sam.11149   URL: http://dx.doi.org/10.1002/sam.11149    
  • Pi D, de Badyn MHudoba, Nimmo M, White R, Pal J, Wong P, et al.   Application of linear discriminant analysis in performance evaluation of extractable nuclear antigen immunoassay systems in the screening and diagnosis of systemic autoimmune rheumatic diseases   American journal of clinical pathology. 2012   138:   596–603.        
  • Poh CF, Zhu Y, Chen E, Berean KW, Wu L, Zhang L, et al.   Unique FISH Patterns Associated with Cancer Progression of Oral Dysplasia   Journal of Dental Research [Internet]. 2012   91:   52–57.   DOI: 10.1177/0022034511425676   URL: http://jdr.sagepub.com/content/91/1/52    
  • Rizopoulos D.   Joint Models for Longitudinal and Time-to-Event Data: With Applications in R   . 2012            
  • Shaddick G, Zidek JV.   Preferential sampling in long term monitoring of air pollution: a case study   . 2012            
  • Shaddick G, Zidek JV.   Unbiasing estimates from preferentially sampled spatial data   . 2012            
  • Shangari D, Chen J.   Partial monotonicity of entropy measures   Statistics & Probability Letters. 2012   82:   1935–1940.        
  • Shirani A, Petkau J, Tremlett H.   Treatment with interferon beta for multiple sclerosis: reply   Journal of the American Medical Association. 2012   308:   1627-1628.   DOI: 10.1001/jama.2012.13573      
  • Shirani A, Zhao Y, Karim M, Evans C, Kingwell E, van der Kop M, et al.   Association between use of interferon beta and progression of disability in patients with relapsing-remitting multiple sclerosis   JAMA: The Journal of the American Medical Association [Internet]. 2012   308:   247–256.   DOI: 10.1001/jama.2012.7625   URL: http://jama.jamanetwork.com/article.aspx?articleid=1217239