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Adjusting for Bias Induced by Informative Dose Selection Procedures

Tuesday, October 9, 2018 - 11:00 to 12:00
Nancy Flournoy, University of Missouri (Columbia, MO); Assaf Oron, Institute for Disease Modeling (Bellevue, WA)
Statistics Seminar
Room 4192, Earth Sciences Building (2207 Main Mall)

Many fields such acute toxicity studies, Phase I cancer trials, sensory studies and psychometric testing use informative dose allocation procedures. In this talk, we explain how such adaptive designs induce bias, and in the context of dose-finding designs we show how to modify frequency data to adjust for this bias.

To provide context, we start the talk with a general discussion of issues in inference following adaptive designs. Then, we assume a binary response Y has a monotone positive response prob- ability to a stimulus or treatment X, and we consider designs that sequentially select X values for new subjects in a way that concentrates treatments in a certain region of interest under the dose-response curve. We discuss how data analysis at the end of a study is affected by choosing the stimulus value for each subject sequentially according to some informative sampling rule.

Without loss of generality, we call a positive response a toxicity and the stimulus a dose. For simplicity, we restrict this talk to the case of a univariate treatment X and binary Y, and further assume that treatments are limited to a finite set {d1, d2, . . . , dM } of M values we call doses. Now suppose n subjects receive treatments that were sequentially selected (according so some rule using data from prior subjects) from the restricted set of M doses.  Let Nm and Tm denote the number of subjects receiving treatment dm and the number of toxicities observed on treatment dm, respectively. Define Fm P{Y = 1|X = dm} = E[Y |X = dm].

Then it is often said that the distribution of Tm given Nm is Binomial with parameters (Fm, Nm). But taking Nm as fixed is not the same as conditioning on this random variable, and conditioning on informative dose assignments is not the same as conditioning on summary dose frequencies. Indeed, it is easy to show that the observed dose-specific toxicity rate, Tm/Nm, is biased for Fm. From first principals, we obtain

E[Tm / Nm] = Fm - Cov[Tm/Nm, Nm] / E[Nm]

The observed toxicity rate is biased for Fm because adaptive allocations, by design, induce a correlation between toxicity rates and allocation frequencies.

This bias impacts inference procedures: Isotonic regression methods use dose-specific toxicity rates directly. Standard likelihood-based methods mask the bias by providing first-order linear approximations. We illustrate these biases using isotonic and likelihood-based regression methods in some well known (small sample size) adaptive methods including selected up-and-down designs, interval designs, and the continual reassessment method. Then we propose a bias adjustment inspired by Firth (1993).

[Nancy Flournoy; University of Missouri – http://web.missouri.edu/flournoyn/]

[flournoyn [at] missouri.edu  –   https://en.wikipedia.org/wiki/Nancy_Flournoy]